Citedin finds where you are cited! Some of your papers may have been mentioned where you didn't expect that to happen: in blogs, databases, Wikipedia. Citedin finds them all. Through this website you can track various resources citing a PubMed Identifier. To find a pubmed identifier use this search form.

Examples: Pubmed query: (e.g. Waagmeester, Kelder, Evelo, or WikiPathways) or
Pubmed identifier: (15489334, 18651794)

Publication search powered by Pubmed ?
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API

1. Google Blogs
2. Books: Through google
3. Citeulike
4. Connotea
5. Mendeley
6. Nature.com Blogs
7. Pubmed Subsets

   Database

8. ABS: a database of Annotated regulatory Binding Sites from orthologous promoters
9. Alzforum: Alzheimer Research Forum
10. Biogrid: General Repository for Interaction Datasets
11. CTDatabase: Cancer-Testis Database
12. Cancer Cell Map
13. Cosmic: Catalogue Of Somatic Mutations In Cancer
14. CTD: Comparative Toxicogenomics Database
15. Cutdb: Proteolytic Event Database
16. Deja Vu: a Database of Highly Similar Citations
17. HNF4: data from the Sladek lab at UC Riverside
18. HaemBDb: Haemophilia B Mutation Database
19. Hmdb: Human Metabolome DataBase
20. Iedb: Immune epitope database and analysis resource
21. Intact
22. Jaspar
23. KEGG: Kyoto Encyclopedia of Genes and Genomes
24. MGI: Mouse Genome Informatics
25. MINT: the Molecular INTeraction database
26. Mpidb: The Microbial Protein Interaction Database
27. NFIRegulome: Database for genes regulated by Nuclear Factor I Family
28. Oreganno: The Open REGulatory ANNOtation database
29. Nature Pathway interaction database (NCI)
30. Nature Pathway interaction database (Reactome)
31. PDB: RCSB Protein Data Bank
32. Pleiades genes
33. Regtransbase
34. Uniprot
35. Wormbase
36. ZFIN: The Zebrafish Model Organism Database

    Published data

37. Ares: active antioxidant responsive elements
38. HIF TFBS transcription factor complex composed of HIF1A and ARNT.
39. Gene expression regulation by retinoic acid

    SPARQL endpoint

40. ChEMBL

    Wiki

41. Brede Wiki: a neuroinformatics wiki
42. CHDWiki: Congenital Heart Defects Wiki
43. WikiPathways
44. Wikipedia
45. YTPdb: The Yeast Transport Protein database

If you know a resource that would enrich this website please send us an email

Three types of resources are fit to be included in citedin.org, these are:

• Resources with webservices or an Application Programming Interface (API), which have functionality to search for pubmed identifiers. Examples with an API, are Wikipedia, Google Books, Google Blog and Connotea.

• Complete databases dumps. Most of the resources in citedin.org are obtained through parsing online available database dumps.

• Supplementary data to published papers. Some peer reviewed journal publication contain, next to the genereal references, appendices with (large) sets of pubmed identifiers. These citations, which are available as supplementary data are usually not considered as part of the papers bibliography.

Cited is available through an Application Programming Interface (API).

Return all included resource names

• http://www.citedin.org/webservice.php/resources

Find all citations in all resources of a given Pubmed Identifier (i.e. 15489334)

• http://www.citedin.org/webservice.php/citations?pmid=15489334

Find all citations in a given set of resources resources of a given Pubmed Identifier (i.e. 15489334)

• http://www.citedin.org/webservice.php/citations?pmid=15489334&resource=Uniprot,Wikipathways
• http://www.citedin.org/webservice.php/citations?pmid=15489334&resource=Uniprot

Websites using CitedIn:

• Brede wiki